Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_2894 | ggt1 | cce_2894 | cce_2896 | Unknown; Contains DUF820. | Gamma-glutamyltranspeptidase. | 0.412 |
| cce_2894 | pepP1 | cce_2894 | cce_2895 | Unknown; Contains DUF820. | Aminopeptidase P. | 0.773 |
| cce_3768 | pepP1 | cce_3768 | cce_2895 | Oligopeptidase A. | Aminopeptidase P. | 0.457 |
| efp | guaB | cce_2122 | cce_3209 | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | IMP dehydrogenase. | 0.416 |
| efp | pepP1 | cce_2122 | cce_2895 | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | Aminopeptidase P. | 0.427 |
| folD | guaB | cce_0811 | cce_3209 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | IMP dehydrogenase. | 0.510 |
| folD | nifJ | cce_0811 | cce_0953 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.727 |
| folD | pepP1 | cce_0811 | cce_2895 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Aminopeptidase P. | 0.694 |
| folD | purF | cce_0811 | cce_1211 | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | Amidophosphoribosyl transferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.692 |
| ggt1 | cce_2894 | cce_2896 | cce_2894 | Gamma-glutamyltranspeptidase. | Unknown; Contains DUF820. | 0.412 |
| ggt1 | pepN | cce_2896 | cce_0144 | Gamma-glutamyltranspeptidase. | Aminopeptidase N. | 0.906 |
| ggt1 | pepP1 | cce_2896 | cce_2895 | Gamma-glutamyltranspeptidase. | Aminopeptidase P. | 0.426 |
| guaB | efp | cce_3209 | cce_2122 | IMP dehydrogenase. | Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase. | 0.416 |
| guaB | folD | cce_3209 | cce_0811 | IMP dehydrogenase. | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.510 |
| guaB | nifJ | cce_3209 | cce_0953 | IMP dehydrogenase. | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | 0.706 |
| guaB | pepP1 | cce_3209 | cce_2895 | IMP dehydrogenase. | Aminopeptidase P. | 0.493 |
| guaB | purF | cce_3209 | cce_1211 | IMP dehydrogenase. | Amidophosphoribosyl transferase; Catalyzes the formation of phosphoribosylamine from phosphoribosylpyrophosphate (PRPP) and glutamine. | 0.810 |
| nifJ | folD | cce_0953 | cce_0811 | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | Methenyltetrahydrofolate cyclohydrolase; Catalyzes the oxidation of 5,10-methylenetetrahydrofolate to 5,10-methenyltetrahydrofolate and then the hydrolysis of 5,10- methenyltetrahydrofolate to 10-formyltetrahydrofolate. | 0.727 |
| nifJ | guaB | cce_0953 | cce_3209 | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | IMP dehydrogenase. | 0.706 |
| nifJ | pdhC | cce_0953 | cce_2750 | Pyruvate oxidoreductase; Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin. | Pyruvate dehydrogenase E2 component. | 0.955 |
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