STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2897Unknown; Contains a soluble quinoprotein glucose dehydrogenase domain. (394 aa)    
Predicted Functional Partners:
cce_1854
Unknown.
 
 
 
 0.838
cce_1857
NifU-like protein.
 
  
 0.813
cce_1743
Probable peptidase M52, hydrogen uptake protein.
  
     0.775
hupL
[NiFe] uptake hydrogenase large subunit.
  
     0.774
hupS
[NiFe] uptake hydrogenase small subunit.
  
     0.773
cce_4796
Putative peptidase; Belongs to the peptidase S8 family.
  
 
 0.745
cce_1901
Putative pathogenesis related protein.
  
     0.514
cce_2039
Putative six-hairpin glycosidase familly protein.
    
   0.495
cce_3720
DUF218-containing protein.
  
     0.492
cyl0018
Conserved hypothetical protein.
  
 
   0.485
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.