Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| cce_1579 | cce_2912 | cce_1579 | cce_2912 | Unknown; Contains a fimbrial assembly domain. | Hypothetical protein. | 0.793 |
| cce_1579 | gspD | cce_1579 | cce_1581 | Unknown; Contains a fimbrial assembly domain. | General secretion pathway protein D. | 0.982 |
| cce_1579 | pilC | cce_1579 | cce_0418 | Unknown; Contains a fimbrial assembly domain. | Pilin biogenesis protein. | 0.803 |
| cce_1579 | pilM | cce_1579 | cce_1578 | Unknown; Contains a fimbrial assembly domain. | Type IV pilus assembly protein. | 0.996 |
| cce_1615 | cce_2912 | cce_1615 | cce_2912 | Putative HofG-like general secretion pathway protein. | Hypothetical protein. | 0.849 |
| cce_1615 | hofD | cce_1615 | cce_3163 | Putative HofG-like general secretion pathway protein. | Type 4 prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.816 |
| cce_1615 | pilC | cce_1615 | cce_0418 | Putative HofG-like general secretion pathway protein. | Pilin biogenesis protein. | 0.898 |
| cce_1615 | pilM | cce_1615 | cce_1578 | Putative HofG-like general secretion pathway protein. | Type IV pilus assembly protein. | 0.725 |
| cce_1615 | pilT1 | cce_1615 | cce_0419 | Putative HofG-like general secretion pathway protein. | Twitching motility protein. | 0.731 |
| cce_1615 | pilT2 | cce_1615 | cce_0434 | Putative HofG-like general secretion pathway protein. | Twitching motility protein. | 0.690 |
| cce_2840 | cce_2912 | cce_2840 | cce_2912 | Putative HofG-like general secretion pathway protein. | Hypothetical protein. | 0.900 |
| cce_2840 | hofD | cce_2840 | cce_3163 | Putative HofG-like general secretion pathway protein. | Type 4 prepilin peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue. | 0.844 |
| cce_2840 | pilC | cce_2840 | cce_0418 | Putative HofG-like general secretion pathway protein. | Pilin biogenesis protein. | 0.919 |
| cce_2840 | pilM | cce_2840 | cce_1578 | Putative HofG-like general secretion pathway protein. | Type IV pilus assembly protein. | 0.785 |
| cce_2840 | pilT1 | cce_2840 | cce_0419 | Putative HofG-like general secretion pathway protein. | Twitching motility protein. | 0.791 |
| cce_2840 | pilT2 | cce_2840 | cce_0434 | Putative HofG-like general secretion pathway protein. | Twitching motility protein. | 0.774 |
| cce_2912 | cce_1579 | cce_2912 | cce_1579 | Hypothetical protein. | Unknown; Contains a fimbrial assembly domain. | 0.793 |
| cce_2912 | cce_1615 | cce_2912 | cce_1615 | Hypothetical protein. | Putative HofG-like general secretion pathway protein. | 0.849 |
| cce_2912 | cce_2840 | cce_2912 | cce_2840 | Hypothetical protein. | Putative HofG-like general secretion pathway protein. | 0.900 |
| cce_2912 | gspD | cce_2912 | cce_1581 | Hypothetical protein. | General secretion pathway protein D. | 0.757 |
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