Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
cce_0540 | cce_2930 | cce_0540 | cce_2930 | Fmu, rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | Unknown; Contains a phosphatase 2C-like domain. | 0.859 |
cce_0743 | cce_2930 | cce_0743 | cce_2930 | Serine/threonine protein kinase. | Unknown; Contains a phosphatase 2C-like domain. | 0.846 |
cce_0743 | pknA | cce_0743 | cce_1853 | Serine/threonine protein kinase. | Serine/threonine kinase. | 0.402 |
cce_2116 | cce_2822 | cce_2116 | cce_2822 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.405 |
cce_2116 | cce_2930 | cce_2116 | cce_2930 | Serine/threonine protein kinase. | Unknown; Contains a phosphatase 2C-like domain. | 0.818 |
cce_2822 | cce_2116 | cce_2822 | cce_2116 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.405 |
cce_2822 | cce_2930 | cce_2822 | cce_2930 | Serine/threonine protein kinase. | Unknown; Contains a phosphatase 2C-like domain. | 0.821 |
cce_2822 | cce_2943 | cce_2822 | cce_2943 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.446 |
cce_2822 | pknA | cce_2822 | cce_1853 | Serine/threonine protein kinase. | Serine/threonine kinase. | 0.405 |
cce_2930 | cce_0540 | cce_2930 | cce_0540 | Unknown; Contains a phosphatase 2C-like domain. | Fmu, rRNA SAM-dependent methyltransferase; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA. | 0.859 |
cce_2930 | cce_0743 | cce_2930 | cce_0743 | Unknown; Contains a phosphatase 2C-like domain. | Serine/threonine protein kinase. | 0.846 |
cce_2930 | cce_2116 | cce_2930 | cce_2116 | Unknown; Contains a phosphatase 2C-like domain. | Serine/threonine protein kinase. | 0.818 |
cce_2930 | cce_2822 | cce_2930 | cce_2822 | Unknown; Contains a phosphatase 2C-like domain. | Serine/threonine protein kinase. | 0.821 |
cce_2930 | cce_2943 | cce_2930 | cce_2943 | Unknown; Contains a phosphatase 2C-like domain. | Serine/threonine protein kinase. | 0.821 |
cce_2930 | cce_2951 | cce_2930 | cce_2951 | Unknown; Contains a phosphatase 2C-like domain. | Serine/threonine protein kinase. | 0.821 |
cce_2930 | cce_3614 | cce_2930 | cce_3614 | Unknown; Contains a phosphatase 2C-like domain. | Serine/threonine protein kinase. | 0.817 |
cce_2930 | cce_3901 | cce_2930 | cce_3901 | Unknown; Contains a phosphatase 2C-like domain. | Putative serine/threonine protein kinase. | 0.852 |
cce_2930 | cce_4060 | cce_2930 | cce_4060 | Unknown; Contains a phosphatase 2C-like domain. | Serine/threonine protein kinase. | 0.820 |
cce_2930 | pknA | cce_2930 | cce_1853 | Unknown; Contains a phosphatase 2C-like domain. | Serine/threonine kinase. | 0.830 |
cce_2943 | cce_2822 | cce_2943 | cce_2822 | Serine/threonine protein kinase. | Serine/threonine protein kinase. | 0.446 |
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