Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
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Co-expression
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[Homology]
Score
cce_2951Serine/threonine protein kinase. (521 aa)    
Predicted Functional Partners:
cce_0149
Probable protein phosphatase.
 
 
 0.836
cce_0316
Probable serin-threonin phosphatase.
  
   0.828
cce_2930
Unknown; Contains a phosphatase 2C-like domain.
  
   0.827
cce_2196
WD-repeat protein.
 
     0.770
cce_0481
Unknown; Contains TPR_1 tetratricopeptide repeat domains.
 
    0.646
cce_0588
Unknown; Contains TPR_1 tetratricopeptide repeat domains.
 
 
    0.517
cce_1000
Unknown; Contains a SMAD/FHA domain.
 
  
   0.492
cce_3581
WD-40 repeat protein.
 
     0.472
cce_2288
Unknown; Contains TPR_1 tetratricopeptide repeat domains.
 
 
    0.422
cce_2435
Unknown; Contains DUF323.
 
    0.401
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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