STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_2965CHP1784-containing protein. (88 aa)    
Predicted Functional Partners:
cce_1711
CHP1784-containing protein.
 
     0.794
xisH2
Probable fdxN element excision controlling factor protein.
  
     0.665
cce_3286
XisI-like fdxN element excision controlling factor protein.
  
     0.652
xisH1
Probable fdxN element excision controlling factor protein.
  
     0.631
xisI1
Probable fdxN element excision controlling factor protein.
  
     0.623
xisI2
Probable fdxN element excision controlling factor protein.
  
     0.614
xisH4
Putative fdxN element excision controlling factor protein.
  
     0.605
cce_1831
Hypothetical protein; Contains a CHP1784 domain.
  
     0.598
cce_3240
Contains an abortive infection protein domain.
  
     0.587
xisH3
Putative fdxN element excision controlling factor protein.
  
     0.575
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.