STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3022Unknown; Contains a haloacid dehalogenase-like hydrolase domain. (264 aa)    
Predicted Functional Partners:
cce_3360
Hypothetical protein; Contains a 2Fe-2S Ferredoxin-like domain.
  
     0.744
cce_1167
Conserved hypothetical protein.
  
     0.726
cce_3900
Conserved hypothetical protein.
  
     0.692
cce_1058
DUF1230-containing protein.
  
     0.669
cce_3683
Hypothetical protein; Contains a GCN5-related N-acetyltransferase domain.
  
     0.650
cce_2723
Conserved hypothetical protein.
  
     0.638
moaA
Molybdenum cofactor biosynthesis protein A; Catalyzes the cyclization of GTP to (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate.
  
    0.630
cce_3752
Conserved hypothetical protein.
  
     0.625
atp1
ATP synthase subunit 1.
  
     0.625
cce_1050
Conserved hypothetical protein.
  
     0.620
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.