Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_3069Unknown. (325 aa)    
Predicted Functional Partners:
cce_4675
Hypothetical protein; Contains Serralysin-like metalloprotease, C-terminal and Peptidase, archaeal and bacterial C-terminal domains.
  
     0.772
cce_3033
Hypothetical protein; Contains a serralysin-like metalloprotease, C-terminal domain.
  
     0.767
cce_3041
Conserved hypothetical protein.
  
     0.705
cce_4551
Unknown; Contains an ASPIC/UnbV domain.
  
     0.661
cce_3043
Putative thioester reductase.
  
     0.636
cce_3082
Putative bacterial luciferase-like protein.
  
     0.600
cce_0699
Hypothetical protein.
  
     0.578
cce_3077
AMP-dependent synthetase and ligase, probable acyl-CoA synthase.
  
     0.571
cce_3068
ATP-binding protein of ABC transporter.
 
     0.556
cce_4466
Hypothetical protein.
  
     0.536
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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