Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_3074Polyketide synthase type I. (1573 aa)    
Predicted Functional Partners:
cce_1466
Probable AMP-dependent synthetase and ligase.
 0.997
cce_1025
AMP-dependent synthetase and ligase/probable acyl-CoA synthase.
 0.987
cce_3055
Peptide synthetase.
  
0.987
cce_1421
Putative type II thioesterase.
  
 0.986
cce_3758
AMP-dependent synthetase and ligase.
 0.986
cce_3034
Peptide synthetase.
  
0.985
cce_3050
Peptide synthetase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
0.985
cce_0204
AMP-dependent synthetase and ligase.
 0.983
cce_1418
Probable AMP-dependent synthetase and ligase.
 0.983
cce_1654
AMP-dependent synthetase and ligase/probable acyl-CoA synthase.
 0.983
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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