STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3085Unknown; Contains a glyoxalase/bleomycin resistance protein/dioxygenase domain. (153 aa)    
Predicted Functional Partners:
cce_3692
Hypothetical protein; Contains a GCN5-related N-acetyltransferase domain.
  
     0.752
cce_2140
Unknown.
  
     0.741
cce_0018
Unknown; Contains a beta-lactamase-like domain.
  
 
 0.677
cce_0207
Conserved hypothetical protein.
  
     0.673
cce_4731
Hypothetical protein; Contains a metallophosphoesterase domain.
  
     0.666
cce_4179
Unknown.
  
    0.650
cce_3095
Conserved hypothetical protein.
  
    0.638
cce_3078
Polyketide synthase.
  
 
 0.628
cce_2011
Hypothetical protein; Contains a Cupin, RmlC-type domain.
 
     0.613
cce_4601
Unknown; Contains a phospholipid/glycerol acyltransferase domain.
  
 
   0.569
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.