STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3174Transcriptional regulator. (246 aa)    
Predicted Functional Partners:
cce_2596
Hypothetical protein; Contains a Lipolytic enzyme, G-D-S-L domain.
  
     0.735
cce_2996
Unknown.
  
     0.691
cce_4326
Conserved hypothetical protein.
  
     0.691
cce_2880
Conserved hypothetical protein.
  
 
   0.679
cce_0207
Conserved hypothetical protein.
  
     0.670
cce_4377
DUF1092-containing protein.
  
     0.667
cce_2716
Unknown.
  
 
 
 0.656
cce_0812
Hypothetical protein.
  
     0.642
cce_2672
Conserved hypothetical protein.
  
    0.627
cce_3173
Hypothetical protein; Contains an aminoacyl-tRNA synthetase, class 1a, anticodon-binding domain.
       0.602
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.