STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cpcSUnknown; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins. (198 aa)    
Predicted Functional Partners:
cpcT
DUF1001-containing protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.898
cpcG
Phycobilisome rod-core linker polypeptide; Belongs to the phycobilisome linker protein family.
 
   
 0.871
apcA
Allophycocyanin alpha subunit.
  
   
 0.844
cpcB
Phycocyanin beta subunit.
  
   
 0.815
cpcA
Phycocyanin alpha subunit.
  
   
 0.813
apcB
Allophycocyanin beta subunit.
  
   
 0.812
apcF
Phycobilisome core component.
  
   
 0.799
apcD
allophycocyanin-B.
  
   
 0.799
cpcC2
Phycocyanin associated linker protein; Belongs to the phycobilisome linker protein family.
 
   
 0.779
apcC
Phycobilisome LC linker polypeptide; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
   
 0.772
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.