STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_3259Conserved hypothetical protein. (561 aa)    
Predicted Functional Partners:
cce_3257
Hypothetical protein; Contains an EF-Hand type domain.
       0.773
cce_3258
Hypothetical protein.
       0.773
cce_4615
Dolichyl-phosphate-mannose synthase.
  
 0.641
cce_1098
Putative N-6 DNA methylase.
  
     0.639
cce_1102
Putative helicase.
  
     0.621
ribD
Riboflavin biosynthesis protein; Converts 2,5-diamino-6-(ribosylamino)-4(3h)-pyrimidinone 5'- phosphate into 5-amino-6-(ribosylamino)-2,4(1h,3h)-pyrimidinedione 5'- phosphate; In the C-terminal section; belongs to the HTP reductase family.
       0.598
cce_2148
Putative plasmid maintenance toxin/Cell growth inhibitor.
  
     0.579
rpl32
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
       0.572
cce_5168
Hypothetical protein.
  
     0.556
cce_2471
Putative adenine specific DNA methyltransferase.
  
     0.544
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.