STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3286XisI-like fdxN element excision controlling factor protein. (113 aa)    
Predicted Functional Partners:
xisH3
Putative fdxN element excision controlling factor protein.
 
     0.951
xisH1
Probable fdxN element excision controlling factor protein.
  
   
 0.776
xisH2
Probable fdxN element excision controlling factor protein.
  
   
 0.776
xisH4
Putative fdxN element excision controlling factor protein.
  
     0.775
cce_3284
Hypothetical protein; Contains DUF433.
       0.686
cce_2965
CHP1784-containing protein.
  
     0.652
cce_2204
Hypothetical protein.
  
     0.601
cce_3287
Hypothetical protein; Contains a UspA domain.
       0.574
cce_3283
Hypothetical protein; Contains a DUF1524 RloF domain.
       0.560
cce_4136
Hypothetical protein; Contains a glycosyl transferase, family 39 and a TPR-like helical domain.
  
     0.544
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.