STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3318Thiosulfate sulfurtransferase. (276 aa)    
Predicted Functional Partners:
cysH
Phosphoadenosine phosphosulfate reductase; Reduction of activated sulfate into sulfite. Belongs to the PAPS reductase family. CysH subfamily.
    
 0.925
sir
Ferredoxin-sulfite reductase; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
    
 0.925
cce_0202
NifS-like class-V aminotransferase, probable cysteine desulfurase.
   
 0.921
cce_0279
NifS-like class-V aminotransferase, probable cysteine desulfurase; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
   
 0.921
nifS
Nitrogenase cofactor synthesis protein; Catalyzes the removal of elemental sulfur atoms from cysteine to produce alanine.
   
 0.921
aspC
Aspartate aminotransferase.
     
 0.909
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
   
 
 0.908
cce_2006
Hypothetical protein; Contains a DoxX domain.
  
 
  0.901
cce_3319
Hypothetical protein; Contains an ATP-binding region, ATPase-like domain.
      0.862
cce_0210
Cysteine synthase.
  
 
 0.858
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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