STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3321Anti-sigma factor antagonist; Belongs to the anti-sigma-factor antagonist family. (107 aa)    
Predicted Functional Partners:
cce_0234
Unknown; Contains a stage II sporulation E domain.
 
 
 0.921
cce_3428
Hypothetical protein.
 
 
 0.838
cce_3319
Hypothetical protein; Contains an ATP-binding region, ATPase-like domain.
 
 
 0.837
cce_0656
Two-component hybrid sensor and regulator.
 
  
 0.829
pmgA
Photomixotrophic growth related protein.
  
 
 0.811
cce_3320
Two-component response regulator.
 
 
 0.806
cce_4177
Hypothetical protein; Contains a GGDEF domain, Forkhead-associated domain, EAL domain, SMAD/FHA domain, and a PAS fold domain.
  
  
 0.783
cce_4651
Hypothetical protein; Contains an EAL signaling domain.
  
  
 0.783
cce_2668
ATP-binding protein of ABC transporter.
   
   0.770
cce_2669
Unknown; Contains a mammalian cell entry related domain.
  
   0.767
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.