STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3334Glycosyl transferase, family 2. (309 aa)    
Predicted Functional Partners:
cce_3333
Unknown; Contains a glycosyl transferase domain.
 
     0.857
cce_1994
Unknown.
 
  
 0.768
gmd-2
NAD-dependent epimerase/dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.761
cce_2596
Hypothetical protein; Contains a Lipolytic enzyme, G-D-S-L domain.
  
     0.756
cce_0412
Glycosyl transferase, family 2.
    0.753
cce_4589
Glycosyl transferase, group 1.
  
     0.753
cce_0126
Putative Glycosyl transferase, group 1.
  
     0.711
cce_2926
Unknown.
  
     0.685
cce_3590
Glycosyl transferase, group 1.
  
     0.680
cce_3337
Putative Glycosyl transferase, group 1.
 
     0.650
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.