STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xdhCPutative xanthine dehydrogenase accessory factor. (384 aa)    
Predicted Functional Partners:
cce_3339
Hypothetical protein.
  
 0.997
cce_3509
Unknown; Contains Molybdopterin dehydrogenase, FAD-binding and CO dehydrogenase flavoprotein, C-terminal domains.
 
  
 0.939
cce_3508
Putative Oxidoreductase iron-sulphur binding subunit, IorA.
 
 
 0.928
cce_3510
Putative Carbon monoxide dehydrogenase molybdoprotein.
 
  
 0.871
cce_3337
Putative Glycosyl transferase, group 1.
       0.547
moaC1
Molybdenum cofactor biosynthesis protein C; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
 
  
 0.456
moaE
Molybdopterin (MPT) converting factor, subunit 2.
 
   
 0.424
cce_3336
RNA-binding protein.
       0.410
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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