STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3357Conserved hypothetical protein. (173 aa)    
Predicted Functional Partners:
cce_3678
Unknown.
    
 0.908
cce_3543
Unknown; Contains a sporulation related domain.
  
     0.663
cce_2245
DUF928-containing protein.
  
     0.626
cce_0270
Unknown.
  
     0.534
cce_3532
Putative membrane protein.
  
     0.531
cce_0598
Unknown; Contains an S-layer homology (SLH) domain.
  
     0.522
cce_1294
Conserved hypothetical protein.
  
     0.518
psaJ
Photosystem I reaction center subunit IX; May help in the organization of the PsaE and PsaF subunits. Belongs to the PsaJ family.
  
     0.505
cce_1192
Hypothetical protein; Contains winged helix repressor DNA-binding and a helix-turn-helix, type 11 domains.
  
     0.474
cce_2112
Hypothetical protein; Contains a 4-vinyl reductase, 4VR domain.
  
     0.468
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.