Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| atpA2 | ctaB | cce_1503 | cce_4600 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | 0.442 |
| atpA2 | cydA | cce_1503 | cce_3415 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Cytochrome D ubiquinol oxidase chain I; Belongs to the cytochrome ubiquinol oxidase subunit 1 family. | 0.443 |
| atpA2 | cydB | cce_1503 | cce_3414 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Cytochrome D ubiquinol oxidase chain II. | 0.450 |
| atpA2 | hoxF | cce_1503 | cce_2318 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | NADH dehydrogenase I chain F. | 0.962 |
| atpA2 | sdhA | cce_1503 | cce_0663 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Succinate dehydrogenase flavoprotein subunit. | 0.645 |
| atpA2 | sdhB | cce_1503 | cce_3244 | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | Succinate dehydrogenase iron-sulphur protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.724 |
| cce_3413 | cce_3416 | cce_3413 | cce_3416 | Hypothetical protein. | Unknown; Contains an ABC-1 domain. | 0.557 |
| cce_3413 | cydA | cce_3413 | cce_3415 | Hypothetical protein. | Cytochrome D ubiquinol oxidase chain I; Belongs to the cytochrome ubiquinol oxidase subunit 1 family. | 0.682 |
| cce_3413 | cydB | cce_3413 | cce_3414 | Hypothetical protein. | Cytochrome D ubiquinol oxidase chain II. | 0.706 |
| cce_3416 | cce_3413 | cce_3416 | cce_3413 | Unknown; Contains an ABC-1 domain. | Hypothetical protein. | 0.557 |
| cce_3416 | cydA | cce_3416 | cce_3415 | Unknown; Contains an ABC-1 domain. | Cytochrome D ubiquinol oxidase chain I; Belongs to the cytochrome ubiquinol oxidase subunit 1 family. | 0.628 |
| cce_3416 | cydB | cce_3416 | cce_3414 | Unknown; Contains an ABC-1 domain. | Cytochrome D ubiquinol oxidase chain II. | 0.628 |
| ctaB | atpA2 | cce_4600 | cce_1503 | Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.442 |
| ctaB | cydA | cce_4600 | cce_3415 | Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome D ubiquinol oxidase chain I; Belongs to the cytochrome ubiquinol oxidase subunit 1 family. | 0.552 |
| ctaB | cydB | cce_4600 | cce_3414 | Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Cytochrome D ubiquinol oxidase chain II. | 0.511 |
| ctaB | hoxF | cce_4600 | cce_2318 | Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | NADH dehydrogenase I chain F. | 0.519 |
| ctaB | narB | cce_4600 | cce_1214 | Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Nitrate reductase; Belongs to the prokaryotic molybdopterin-containing oxidoreductase family. NasA/NapA/NarB subfamily. | 0.444 |
| ctaB | sdhA | cce_4600 | cce_0663 | Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Succinate dehydrogenase flavoprotein subunit. | 0.518 |
| ctaB | sdhB | cce_4600 | cce_3244 | Cytochrome c oxidase folding protein; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group. | Succinate dehydrogenase iron-sulphur protein subunit; Belongs to the succinate dehydrogenase/fumarate reductase iron-sulfur protein family. | 0.432 |
| cydA | atpA2 | cce_3415 | cce_1503 | Cytochrome D ubiquinol oxidase chain I; Belongs to the cytochrome ubiquinol oxidase subunit 1 family. | ATP synthase F1, alpha subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The alpha chain is a regulatory subunit. Belongs to the ATPase alpha/beta chains family. | 0.443 |
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