close STRING v12.5 is now available!
The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
Explore STRING v12.5 →
STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3429Hypothetical protein; Contains Anti-Sigma-factor antagonist (STAS) and glycosyl transferase domains. (336 aa)    
Predicted Functional Partners:
cce_3428
Hypothetical protein.
  
 
 0.960
cce_1468
Putative lipopolysaccharide biosynthesis.
 
  
 0.951
cce_1994
Unknown.
 
  
 0.940
cce_0656
Two-component hybrid sensor and regulator.
  
  
 0.860
cce_4177
Hypothetical protein; Contains a GGDEF domain, Forkhead-associated domain, EAL domain, SMAD/FHA domain, and a PAS fold domain.
  
  
 0.840
cce_4651
Hypothetical protein; Contains an EAL signaling domain.
  
  
 0.840
cce_3739
Putative UDP-N-acetyl-D-mannosaminuronic acid transferase; Belongs to the glycosyltransferase 26 family.
    
 0.834
pmgA
Photomixotrophic growth related protein.
  
 
 0.833
cce_3319
Hypothetical protein; Contains an ATP-binding region, ATPase-like domain.
  
 
 0.833
cce_0970
Two-component transcription regulator.
  
  
 0.805
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: medium (48%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.