Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_3502Unknown. (164 aa)    
Predicted Functional Partners:
cce_2011
Hypothetical protein; Contains a Cupin, RmlC-type domain.
  
     0.759
cce_3689
Conserved hypothetical protein.
  
     0.678
cce_4277
Putative saccharopine dehydrogenase.
  
     0.657
cce_0086
Hypothetical protein; Contains an alpha/beta hydrolase fold-1 domain.
  
     0.656
cce_0238
Hypothetical protein; Contains a putative thiol-disulphide oxidoreductase DCC domain.
  
     0.622
cce_0291
Unknown; Contains a heat shock protein DnaJ, N-terminal domain.
  
     0.615
cce_4449
Conserved hypothetical protein.
  
     0.596
cce_2490
Conserved hypothetical protein.
 
   
 0.592
cce_2722
Unknown.
  
     0.588
cce_3503
ATP-binding protein of ABC transporter.
       0.584
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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