STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3523Unknown. (212 aa)    
Predicted Functional Partners:
ccmL
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.835
ccmK2
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.824
ccmO
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.812
ccmK1
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.807
ccmK4
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.794
ccmK3
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.662
cce_2067
Carbohydrate kinase, FGGY family.
  
     0.547
cce_3627
DUF1257-containing protein.
  
     0.524
ccmM
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.426
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.