STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3528Hypothetical protein; Contains an alpha/beta hydrolase fold-1 domain. (299 aa)    
Predicted Functional Partners:
cce_3077
AMP-dependent synthetase and ligase, probable acyl-CoA synthase.
  
 0.800
cce_3078
Polyketide synthase.
  
 0.761
cce_3079
Probable polyketide synthase.
  
 0.741
cce_3527
Conserved hypothetical protein.
       0.592
cce_0745
Esterase.
  
     0.581
cce_3900
Conserved hypothetical protein.
  
     0.560
cce_4448
Probable alpha/beta hydrolase.
  
     0.538
cce_2129
Unknown.
  
     0.530
psbO
Photosystem II manganese-stabilizing polypeptide, 33 kD extrinsic protein; MSP binds to a putative Mn-binding protein and keeps 2 of the 4 Mn-atoms associated with PSII.
  
     0.505
cce_1365
Unknown.
  
     0.496
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.