STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3565Conserved hypothetical protein. (650 aa)    
Predicted Functional Partners:
cce_1795
Conserved hypothetical protein.
  
     0.664
cce_3566
Hypothetical protein; Contains DUF820.
       0.651
cce_2596
Hypothetical protein; Contains a Lipolytic enzyme, G-D-S-L domain.
  
     0.619
cce_4050
Contains an Acyl carrier protein-like domain.
  
    0.607
cce_0772
Unknown; Contains a FAD dependent oxidoreductase domain.
  
     0.575
clpS2
Putative ATP-dependent Clp protease, adaptor protein; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family.
  
    0.552
cce_3564
Unknown.
       0.548
cce_2626
Unknown.
  
     0.535
cce_4611
Unknown.
  
     0.512
cce_3240
Contains an abortive infection protein domain.
  
     0.509
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.