STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcyAPutative ferredoxin-dependent bilin reductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family. (246 aa)    
Predicted Functional Partners:
ho1
Heme oxygenase (decyclizing).
 
  
 0.966
bvdR
Oxidoreductase, putative biliverdin reductase.
     
 0.953
ho2
Heme oxygenase.
 
  
 0.935
cpcS-2
Unknown; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.799
cce_3583
Putative CAB/ELIP/HLIP family protein.
  
     0.775
cce_1969
Unknown.
  
     0.774
cce_3362
Unknown; Contains a eukaryotic transcription factor, DNA-binding domain.
  
     0.774
cce_3360
Hypothetical protein; Contains a 2Fe-2S Ferredoxin-like domain.
  
 
 
 0.773
cce_3419
Unknown.
  
     0.772
cce_2265
Unknown.
  
     0.771
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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