Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_3588Glucose/ribitol short chain dehydrogenase/reductase family protein; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (276 aa)    
Predicted Functional Partners:
cce_3034
Peptide synthetase.
 
  
 0.755
cce_3589
Hypothetical protein.
       0.686
cce_3075
Peptide synthetase.
 
    
 0.593
cce_3078
Polyketide synthase.
  
 
 0.555
cce_3042
Peptide synthetase.
 
  
 0.543
cce_3079
Probable polyketide synthase.
  
 
 0.538
cce_2045
Unknown; Contains a TPR-like helical domain.
  
     0.510
aspC2
Aspartate aminotransferase.
  
     0.481
cce_3043
Putative thioester reductase.
    
 0.466
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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