STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3623Putative membrane protein. (435 aa)    
Predicted Functional Partners:
cce_5094
Hypothetical protein.
  
     0.655
cce_2986
Unknown.
  
     0.637
cce_5144
Putative AAA ATPase.
  
     0.612
cce_4538
Hypothetical protein.
  
     0.596
cce_3622
Hypothetical protein.
       0.565
cce_4688
Unknown.
  
     0.531
cce_3356
CHP374-containing protein.
  
     0.527
cce_0117
Hypothetical protein.
  
     0.525
cce_3624
Glycosyl transferase, family 2.
       0.508
cce_1180
Unknown; Contains a cupredoxin domain.
  
     0.478
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.