STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3652Conserved hypothetical protein. (71 aa)    
Predicted Functional Partners:
cce_3653
DUF1257-containing protein.
 
  
 0.946
cce_3654
Putative ferredoxin-like protein.
 
     0.876
cce_3383
Unknown.
  
     0.775
cce_2055
Unknown.
  
     0.770
psbV
Photosystem II extrinsic protein, cytochrome c550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.
  
     0.770
rpl32
50S ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.769
psbU
Photosystem II 12 kD extrinsic protein; Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation.
  
     0.762
cce_3362
Unknown; Contains a eukaryotic transcription factor, DNA-binding domain.
  
     0.753
rpoZ
Putative RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
     0.743
cpcS-2
Unknown; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.720
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.