STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3654Putative ferredoxin-like protein. (140 aa)    
Predicted Functional Partners:
cce_3653
DUF1257-containing protein.
 
     0.915
cce_3652
Conserved hypothetical protein.
 
     0.876
cce_3752
Conserved hypothetical protein.
  
     0.767
cce_0488
Unknown; Contains a GUN4-like domain.
  
     0.756
cce_1050
Conserved hypothetical protein.
  
     0.751
cce_1058
DUF1230-containing protein.
  
     0.748
psaE
Photosystem I reaction center subunit IV; Stabilizes the interaction between PsaC and the PSI core, assists the docking of the ferredoxin to PSI and interacts with ferredoxin-NADP oxidoreductase; Belongs to the PsaE family.
  
     0.741
cce_2129
Unknown.
  
     0.732
cce_0650
UPF YGGT-containing protein.
  
     0.727
cce_1969
Unknown.
  
     0.706
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.