STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbiQ2Putative cobalt ABC transporter permease protein. (256 aa)    
Predicted Functional Partners:
cce_3678
Unknown.
 
 0.996
cbiM
Cobalamin (vitamin B12) biosynthesis.
 
 0.995
cce_4071
Probable cobalt ABC transporter ATP binding protein.
 
 0.994
cce_0342
ATP-binding protein of ABC transporter.
  
 
 0.849
cce_0910
ATP-binding protein of ABC transporter.
  
 
 0.849
cce_4351
Putative BioY protein.
  
 
 0.836
cce_4579
Two-component hybrid sensor and regulator.
  
 
 0.801
cce_3680
Conserved hypothetical protein.
  
    0.774
cbiGH
Probable bifunctional Cobalamin (vitamin B12) biosynthesis/precorrin-3B C17-methyltransferase.
  
  
 0.762
cce_1530
ATP-binding protein of ABC transporter.
 
 
 0.747
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.