STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3689Conserved hypothetical protein. (370 aa)    
Predicted Functional Partners:
cce_0241
Hypothetical protein; Contains a UbiA prenyltransferase domain.
 
  
 0.982
cce_3547
Cyclopropane-fatty-acyl-phospholipid synthase; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
  
  
 0.978
cce_2731
Probable cyclopropane-fatty-acyl-phospholipid synthase; Belongs to the class I-like SAM-binding methyltransferase superfamily. gTMT family.
     
  0.900
cce_3688
Hypothetical protein.
       0.773
cce_1677
Conserved hypothetical protein.
  
     0.759
cce_0086
Hypothetical protein; Contains an alpha/beta hydrolase fold-1 domain.
  
     0.750
cce_0862
Unknown.
  
     0.748
cce_4277
Putative saccharopine dehydrogenase.
  
     0.726
desA
Fatty acid desaturase.
  
     0.719
cce_4377
DUF1092-containing protein.
  
     0.719
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.