STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glcEGlycolate oxidase subunit. (443 aa)    
Predicted Functional Partners:
glcF
Glycolate oxidase subunit (Fe-S) protein.
 
 0.996
glcD
Glycolate oxidase subunit.
  
  
 
0.929
cce_0591
KHG-KDPG bifunctional aldolase.
   
 
 0.910
cce_0753
Probable HAD-superfamily hydrolase, subfamily IA, variant 1.
    
 0.905
cce_1821
Putative HAD-superfamily hydrolase, subfamily IA.
    
 0.905
cce_2871
Alanine--glyoxylate/serine-pyruvate aminotransferase, aminotransferase class V.
  
 
 0.904
hoxF
NADH dehydrogenase I chain F.
   
   0.729
cce_4306
Unknown; Contains a FAD linked oxidase, N-terminal domain.
  
     0.692
cce_1006
Unknown; Contains a FAD linked oxidase, N-terminal domain.
  
     0.606
cce_3706
ThiamineS-like protein.
       0.522
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.