STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3741Hypothetical protein. (132 aa)    
Predicted Functional Partners:
coaE
Putative Dephospho-CoA kinase; Catalyzes the phosphorylation of the 3'-hydroxyl group of dephosphocoenzyme A to form coenzyme A; Belongs to the CoaE family.
       0.551
cce_1293
Unknown.
  
     0.547
cce_3526
Conserved hypothetical protein.
  
     0.528
cce_4188
Unknown; Contains a polysaccharide export protein domain.
  
     0.513
cce_1738
Unknown.
  
     0.510
cce_0053
Unknown; Contains a senescence marker protein-30 (SMP-30) domain.
  
     0.486
cce_0522
Hypothetical protein; Contains a methyltransferase FkbM domain.
  
     0.419
cce_0355
DUF324-containing protein.
  
     0.408
cce_2487
Hypothetical protein.
  
     0.405
cce_0907
Unknown.
  
     0.401
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.