STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3868Hypothetical protein. (303 aa)    
Predicted Functional Partners:
cce_3023
Putative multiple antibiotic resistance (MarC)-like protein.
  
     0.631
cce_3870
Sulfatase.
 
     0.625
cce_4551
Unknown; Contains an ASPIC/UnbV domain.
  
     0.576
cce_3869
Hypothetical protein.
       0.561
cce_3844
Hypothetical protein; Contains DUF202.
  
     0.519
cce_3069
Unknown.
  
     0.487
cce_2393
Hypothetical protein; Contains a YcfA domain.
  
     0.441
cce_3871
Hypothetical protein; Contains UPF0114.
  
  
 0.429
cce_0403
Hypothetical protein; Contains a MscS mechanosensitive ion channel domain.
 
    0.409
cce_4886
Hypothetical protein.
  
     0.406
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.