Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_3901Putative serine/threonine protein kinase. (697 aa)    
Predicted Functional Partners:
cce_0149
Probable protein phosphatase.
 
 
 0.854
cce_0316
Probable serin-threonin phosphatase.
 
 
 0.853
cce_2930
Unknown; Contains a phosphatase 2C-like domain.
 
 
 0.848
cce_3900
Conserved hypothetical protein.
       0.538
cce_1466
Probable AMP-dependent synthetase and ligase.
  
  
 0.530
cce_3055
Peptide synthetase.
  
  
 0.523
cce_2196
WD-repeat protein.
    0.514
cce_3581
WD-40 repeat protein.
    0.513
cce_2232
Two-component sensor histidine kinase; Involved in chemotaxis. Part of a chemotaxis signal transduction system that modulates chemotaxis in response to various stimuli. Catalyzes the demethylation of specific methylglutamate residues introduced into the chemoreceptors (methyl-accepting chemotaxis proteins or MCP) by CheR. Also mediates the irreversible deamidation of specific glutamine residues to glutamic acid. Belongs to the CheB family.
   
 
 0.492
cce_1131
Unknown; Contains a WD-40 repeat and a protein kinase.
 
  
0.475
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
Server load: low (12%) [HD]