STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3942Hypothetical protein. (68 aa)    
Predicted Functional Partners:
cce_3943
Hypothetical protein.
 
     0.949
cce_3112
Hypothetical protein.
  
     0.774
cce_3857
Hypothetical protein.
  
     0.774
cce_3944
Hypothetical protein; Contains a Lambda repressor-like, DNA-binding domain.
 
     0.627
xisH4
Putative fdxN element excision controlling factor protein.
  
     0.538
cce_2415
XisI-like fdxN element excision controlling factor protein.
  
     0.476
xisH1
Probable fdxN element excision controlling factor protein.
  
     0.451
xisH2
Probable fdxN element excision controlling factor protein.
  
     0.441
xisH3
Putative fdxN element excision controlling factor protein.
  
     0.415
cce_0585
Hypothetical protein; Contains DUF433.
  
     0.410
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.