STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3952Probable cytosine deaminase. (150 aa)    
Predicted Functional Partners:
upp
Uracil phosphoribosyltransferase; Belongs to the UPRTase family.
 
 
 0.935
codA
Putative cytosine deaminase.
    
 0.916
pyrR
Uracil phosphoribosyltransferase/pyrimidine operon regulatory protein; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant.
    
  0.901
cce_1359
Putative creatininase.
     
  0.900
cce_1670
Hydantoinase B/oxoprolinase familly protein.
     
  0.900
cce_3959
Putative creatininase.
     
  0.900
hisIE
Histidine biosynthesis bifunctional protein, phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP pyrophosphohydrolase; In the N-terminal section; belongs to the PRA-CH family.
   
  
 0.869
cce_3953
Conserved hypothetical protein.
       0.773
cce_3954
Unknown.
       0.762
cce_3955
Unknown; Contains a polynucleotidyl transferase, Ribonuclease H fold domain.
   
 
 0.661
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.