STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_3995Conserved hypothetical protein. (226 aa)    
Predicted Functional Partners:
merA
Probable mercuric reductase.
     0.951
mntP
Hypothetical protein; Probably functions as a manganese efflux pump. Belongs to the MntP (TC 9.B.29) family.
       0.608
cce_2941
Hypothetical protein; Contains DUF1499.
 
     0.561
cce_0052
DUF1499-containing protein.
 
     0.507
cce_4296
Unknown; Contains a radical SAM domain.
 
   
 0.492
cce_3192
Probable pyridine nucleotide-disulfide oxidoreductase.
     0.491
cce_2404
Hypothetical protein; Contains glycosyl transferase, family 2 and Methyltransferase FkbM domains.
 
     0.426
xthA
Exodeoxyribonuclease III.
       0.424
cce_3993
C-5 cytosine-specific DNA methylase.
       0.420
gor
Glutathione reductase; Maintains high levels of reduced glutathione.
     0.412
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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