Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_3996Glycosyl transferase, group 1. (420 aa)    
Predicted Functional Partners:
cce_1994
Unknown.
 
  
 0.794
cce_3590
Glycosyl transferase, group 1.
 
     0.747
cce_2596
Hypothetical protein; Contains a Lipolytic enzyme, G-D-S-L domain.
  
     0.647
cce_3234
Undecaprenyl-phosphate galactosephosphotransferase.
 
 
    0.623
cce_2926
Unknown.
  
     0.622
cce_0127
Glucosyl transferase.
 
 
    0.602
cce_1468
Putative lipopolysaccharide biosynthesis.
 
  
 0.563
cce_4188
Unknown; Contains a polysaccharide export protein domain.
  
    0.553
cce_0253
Glycosyl transferase, family 2.
  
    0.534
cce_3092
Probable glycosyl transferase.
 
 
    0.529
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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