Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
cce_4067Unknown; Antitoxin component of a type II toxin-antitoxin (TA) system. (83 aa)    
Predicted Functional Partners:
cce_4066
Putative addiction module toxin, Txe/YoeB.
 
 
 0.968
cce_4068
Putative ATPase, cell wall biosynthesis.
       0.558
cce_4069
Conserved hypothetical protein.
       0.500
cce_4070
Hypothetical protein; Contains DUF990.
       0.497
cce_0050
Putative addiction module toxin, Txe/YoeB.
  
 
 0.419
cce_1706
Putative addiction module toxin, Txe/YoeB.
  
 
 0.419
cce_4261
Putative addiction module toxin, Txe/YoeB.
  
 
 0.419
cce_4263
Putative addiction module toxin, Txe/YoeB.
  
 
 0.419
cce_4071
Probable cobalt ABC transporter ATP binding protein.
       0.417
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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