Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_4073Aminomethyl transferase, glycine cleavage T protein; Belongs to the GcvT family. (368 aa)    
Predicted Functional Partners:
cce_4072
Unknown.
       0.810
gcvH
Glycine cleavage system protein H; The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein.
  
   
 0.768
cce_0021
Unknown; Contains HesB/YadR/YfhF domains; Belongs to the HesB/IscA family.
 
 
 0.676
cce_4092
Hypothetical protein; Contains HesB/YadR/YfhF domains; Belongs to the HesB/IscA family.
 
 
 0.654
hesB
Fe-S cluster biosynthesis, putative nitrogen fixation related protein; Belongs to the HesB/IscA family.
 
 
 0.649
gcvP
Glycine cleavage system protein P; The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
  
   
 0.641
cce_4071
Probable cobalt ABC transporter ATP binding protein.
       0.594
lpdA
Dihydrolipoamide dehydrogenase.
  
     0.512
cce_4070
Hypothetical protein; Contains DUF990.
       0.494
cce_4069
Conserved hypothetical protein.
       0.490
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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