STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4093Unknown. (217 aa)    
Predicted Functional Partners:
cce_4094
Unknown.
       0.718
cce_4998
Contains a PilT protein, N-terminal domain.
  
     0.577
cce_4092
Hypothetical protein; Contains HesB/YadR/YfhF domains; Belongs to the HesB/IscA family.
       0.570
cce_5036
Hypothetical protein; Contains a GCN5-related N-acetyltransferase domain.
  
     0.559
cce_0908
Hypothetical protein; Contains a Lambda repressor-like, DNA-binding domain.
  
     0.511
cce_2945
Contains a secretion protein HlyD domain.
  
     0.511
cce_4623
Putative Rieske [2Fe-2S] domain-containing cell death suppressor protein.
  
     0.476
cce_0723
Hypothetical protein.
  
     0.471
cce_3623
Putative membrane protein.
  
     0.450
cce_2746
Putative DoxX family protein.
  
     0.425
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.