Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cce_4114devC-like ABC transporter permease protein. (384 aa)    
Predicted Functional Partners:
cce_4115
devB-like ABC transporter membrane fusion protein.
 
  
 0.957
cce_4113
devA-like ABC transporter ATP-binding protein.
 
 
 0.943
devA
ABC transporter ATP-binding protein, probable glycolipid exporter.
 
 
 0.859
devB
ABC transporter membrane fusion protein, probable glycolipid exporter.
 
  
 0.829
cce_2192
Putative HlyD-family secretion protein.
 
 
 0.811
cytM
Cytochrome cM.
  
     0.590
cce_0368
ATP-binding protein of ABC transporter.
  
 
 0.539
lolD
ATP-binding protein of ABC transporter; Part of the ABC transporter complex LolCDE involved in the translocation of mature outer membrane-directed lipoproteins, from the inner membrane to the periplasmic chaperone, LolA. Responsible for the formation of the LolA-lipoprotein complex in an ATP-dependent manner.
  
 
 0.539
ndhM
NADH dehydrogenase subunit M; NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone. Couples the redox reaction to proton translocation, and thus conserves the redox energy in a proton gradient. Cyanobacterial NDH-1 also plays a role in inorganic carbon-concentration.
  
     0.518
cce_4116
Hypothetical protein; Contains DUF477.
  
    0.516
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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