STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4185Putative adenosine/AMP deaminase. (349 aa)    
Predicted Functional Partners:
cce_4621
Putative alkaline phosphatase; Belongs to the 5'-nucleotidase family.
    
 0.921
cce_3186
Inosine/uridine-preferring nucleoside hydrolase.
  
 
 0.918
surE1
Stationary-phase survival protein; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
     
 0.907
surE2
Stationary-phase survival protein.
     
 0.907
cce_2662
Conserved hypothetical protein.
  
     0.612
cce_0230
Unknown.
  
     0.583
cce_4509
Unknown; Contains a cytochrome C region domain.
  
     0.575
cce_0550
Conserved hypothetical protein.
  
     0.571
cce_4184
Hypothetical protein; Contains DUF1232.
       0.570
cce_0205
Hypothetical protein.
  
     0.564
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.