Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
crtOZeta-carotene desaturase. (560 aa)    
Predicted Functional Partners:
cce_2233
Putative amine oxidase.
    
 0.937
crtR
Beta-carotene hydroxylase.
    
 0.931
cce_1173
Unknown.
  
 
 0.916
cce_3426
Unknown.
  
 
 0.913
crtB
Phytoene synthase.
 
  
 0.741
cce_4277
Putative saccharopine dehydrogenase.
 
     0.705
chlD
Magnesium chelatase, ATPase subunit D; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX.
  
  
 0.635
cce_4448
Probable alpha/beta hydrolase.
  
    0.585
cce_2220
Unknown; Contains FAD dependent oxidoreductase and Phytoene dehydrogenase-related domains.
  
     0.520
cce_4276
CHP1784-containing protein.
       0.502
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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