STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmMCarbon dioxide concentrating mechanism protein. (666 aa)    
Predicted Functional Partners:
rbcL
Ribulose-1,5-bisphosphate carboxylase/oxygenase large subunit; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site.
  
 
 0.996
ccmN
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.989
icfA1
Beta-carbonic anhydrase, carboxysomal; Reversible hydration of carbon dioxide. Belongs to the beta-class carbonic anhydrase family.
    
 
 0.984
icfA2
Beta-carbonic anhydrase, periplasmic.
    
 
 0.983
rbcS
Ribulose bisphosphate carboxylase small subunit.
    
 
 0.939
ccmK1
Carbon dioxide concentrating mechanism protein.
   
 
 0.906
ccmL
Carbon dioxide concentrating mechanism protein.
   
 
 0.887
ccmK2
Carbon dioxide concentrating mechanism protein.
   
 
 0.885
cce_1922
Unknown.
  
 
   0.835
rbcX
Chaperonin-like protein RbcX.
 
   
 0.809
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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