STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ccmLCarbon dioxide concentrating mechanism protein. (101 aa)    
Predicted Functional Partners:
ccmK1
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.995
ccmK2
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.988
ccmK4
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.967
ccmO
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.959
ccmK3
Carbon dioxide concentrating mechanism protein.
 
 
 
 0.957
ccmM
Carbon dioxide concentrating mechanism protein.
   
 
 0.887
cce_3523
Unknown.
 
 
 
 0.835
atp1
ATP synthase subunit 1.
      
 0.663
atpC1
ATP synthase gamma subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane. The gamma chain is believed to be important in regulating ATPase activity and the flow of protons through the CF(0) complex.
      
 0.663
ccmN
Carbon dioxide concentrating mechanism protein.
   
 
 0.623
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.