Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
cce_4297Conserved hypothetical protein. (243 aa)    
Predicted Functional Partners:
merA
Probable mercuric reductase.
     0.955
cce_4296
Unknown; Contains a radical SAM domain.
 
   
 0.870
cce_4295
Putative methyltransferase.
 
     0.684
cce_2941
Hypothetical protein; Contains DUF1499.
 
     0.662
cce_3192
Probable pyridine nucleotide-disulfide oxidoreductase.
     0.655
cce_0052
DUF1499-containing protein.
 
     0.639
lpdA
Dihydrolipoamide dehydrogenase.
      0.576
cce_2404
Hypothetical protein; Contains glycosyl transferase, family 2 and Methyltransferase FkbM domains.
 
     0.553
gor
Glutathione reductase; Maintains high levels of reduced glutathione.
      0.504
xthA
Exodeoxyribonuclease III.
      0.425
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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