STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cce_4332Hemolysin-type calcium-binding protein. (384 aa)    
Predicted Functional Partners:
cce_4621
Putative alkaline phosphatase; Belongs to the 5'-nucleotidase family.
 
     0.868
cce_3035
Hypothetical protein; Contains a VCBS repeat.
 
   0.813
cce_2542
Hypothetical protein; Contains a serralysin-like metalloprotease, C-terminal domain.
  
    0.720
cce_2192
Putative HlyD-family secretion protein.
 
  
 0.701
cce_4795
Hypothetical protein.
  
     0.585
cce_4759
Putative haem peroxidase.
 
     0.577
cce_3016
Alkaline phosphatase.
 
      0.568
cce_0711
Glycosyl transferase, group 1.
  
     0.567
cce_2678
HlyD-family secretion protein.
  
    0.566
cce_2356
Putative secretion protein, HlyD family.
  
    0.535
Your Current Organism:
Crocosphaera subtropica
NCBI taxonomy Id: 43989
Other names: C. subtropica ATCC 51142, Crocosphaera subtropica ATCC 51142, Cyanothece sp. ATCC 51142, Cyanothece sp. BH68, Cyanothece sp. BH68K
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